Bioinformatician
MultiplexDX, s.r.o.
Place of work
Ilkovičova, Karlova Ves
Ilkovičova, Karlova Ves
Contract type
full-time
full-time
Start date
ASAP
ASAP
Wage (gross)
2 500 EUR/monthNegotiable salary commensurate to your qualifications
2 500 EUR/monthNegotiable salary commensurate to your qualifications
Information about the position
Job description, responsibilities and duties
Our biotech company, MultiplexDX, aims to use the latest advance in molecular biology and the power of transcriptomics to develop novel molecular diagnostic tools for diagnosing diseases such as cancer.
After successfully completing our EIC Accelerator grant, we are planning a large-scale retrospective validation of our molecular diagnostic test for breast cancer called Multiplex8+. This test uses advances in spatial biology to both visualize and sequence a panel of RNA based biomarkers to differentiate subtypes of breast cancer, stratify patients into prognostic risk groups, and evaluate the sensitivity or resistance to diverse treatments ranging from chemotherapies, targeted therapies, and novel antibody drug-conjugates.
Our overarching aim is to augment the patient journay with our precision oncology tools to facilitate personalized, effective, and life-saving treatment plans.
The position:
We are looking for a Bioinformatician to participate in designing and analyzing both next generation sequencing (NGS) and third-generation sequencing (e.g., nanopore) experiments.
In this multifaceted role, you will help advance our pipeline of diagnostic products by analyzing large and complex NGS and long-read data sets, developing software tools and algorithms for automated analysis pipelines, solving technical obstacles, producing rich data visualizations and written reports, and generating new ideas in collaboration with our R&D team.
The posting is for a full-time position and is based in the headquarters in Bratislava, Slovakia.
Responsibilities:
• Work in the R&D team to design and analyze NGS and nanopore sequencing experiments.
• Help develop software and bioinformatic tools to advance automated analysis pipelines.
• Manage and update computational pipelines on cloud-based high-performance computing systems.
• Make data-driven decisions to advance diagnostic pipelines and refine bioinformatic analysis tools.
• Effectively communicate results with internal and external stakeholders using rich data visualizations, oral/written reports, and scientific publications.
After successfully completing our EIC Accelerator grant, we are planning a large-scale retrospective validation of our molecular diagnostic test for breast cancer called Multiplex8+. This test uses advances in spatial biology to both visualize and sequence a panel of RNA based biomarkers to differentiate subtypes of breast cancer, stratify patients into prognostic risk groups, and evaluate the sensitivity or resistance to diverse treatments ranging from chemotherapies, targeted therapies, and novel antibody drug-conjugates.
Our overarching aim is to augment the patient journay with our precision oncology tools to facilitate personalized, effective, and life-saving treatment plans.
The position:
We are looking for a Bioinformatician to participate in designing and analyzing both next generation sequencing (NGS) and third-generation sequencing (e.g., nanopore) experiments.
In this multifaceted role, you will help advance our pipeline of diagnostic products by analyzing large and complex NGS and long-read data sets, developing software tools and algorithms for automated analysis pipelines, solving technical obstacles, producing rich data visualizations and written reports, and generating new ideas in collaboration with our R&D team.
The posting is for a full-time position and is based in the headquarters in Bratislava, Slovakia.
Responsibilities:
• Work in the R&D team to design and analyze NGS and nanopore sequencing experiments.
• Help develop software and bioinformatic tools to advance automated analysis pipelines.
• Manage and update computational pipelines on cloud-based high-performance computing systems.
• Make data-driven decisions to advance diagnostic pipelines and refine bioinformatic analysis tools.
• Effectively communicate results with internal and external stakeholders using rich data visualizations, oral/written reports, and scientific publications.
Employee perks, benefits
We offer a great career with development opportunities in a highly motivating and professional environment. You may be looking for a new career path or simply looking to contribute to a small, hard-working organization with the ambition to make a difference.
You will be offered the opportunity to spearhead the next ground-breaking diagnostic technologies involving RNA-based NGS.
The job will be challenging and rewarding at the same time. You will have world class colleagues, flexible working hours, 4 weeks of paid holiday, and a negotiable salary commensurate to your qualifications (starting from €2500/month Gross pay).
You will be offered the opportunity to spearhead the next ground-breaking diagnostic technologies involving RNA-based NGS.
The job will be challenging and rewarding at the same time. You will have world class colleagues, flexible working hours, 4 weeks of paid holiday, and a negotiable salary commensurate to your qualifications (starting from €2500/month Gross pay).
Information about the selection process
Please send the application including your CV or resume with the names of 2 references and a cover letter to [email protected].
Your application will be treated in accordance with our policies for processing of personal data and the General Data Protection Regulation of the EU.
Your application will be treated in accordance with our policies for processing of personal data and the General Data Protection Regulation of the EU.
Expected date of completion of the selection process
10 May 2024 (there are still 11 more days)
Requirements for the employee
Candidates with education suit the position
University education (Master's degree)
Postgraduate (Doctorate)
Postgraduate (Doctorate)
Educational Specialization
PhD in Bioinformatics, Biology or related field with strong focus on bioinformatics; MSc. will be considered if they demonstrate significant experience..
Language skills
English - Proficiency (C2)
Personality requirements and skills
• PhD in Bioinformatics OR Biology or related fields with strong focus on bioinformatics; MSc. will be considered if they demonstrate significant experience.
• Post graduate experience in industry is a plus.
• Required strong experience with R, Unix command line, and NGS bioinformatics tools; experience with Python is considered a plus.
• Experience with version control system and HPC or cloud computing is considered a plus.
• Solid understanding of basic statistics.
• Ability to work independently and organise own workload.
• Willingness to run both the routine pipeline analyses and ability to develop new workflows.
• Ability to provide bioinformatics support to biological researchers.
• Rigorous analytical and systematic troubleshooting skills.
• Demonstration of goal-oriented, hands-on, and innovative approach to problem solving.
• Excellent written and oral communication skills (English is our working language).
• Post graduate experience in industry is a plus.
• Required strong experience with R, Unix command line, and NGS bioinformatics tools; experience with Python is considered a plus.
• Experience with version control system and HPC or cloud computing is considered a plus.
• Solid understanding of basic statistics.
• Ability to work independently and organise own workload.
• Willingness to run both the routine pipeline analyses and ability to develop new workflows.
• Ability to provide bioinformatics support to biological researchers.
• Rigorous analytical and systematic troubleshooting skills.
• Demonstration of goal-oriented, hands-on, and innovative approach to problem solving.
• Excellent written and oral communication skills (English is our working language).
Advertiser
Brief description of the company
MultiplexDX is one of the most innovative biotech corporations, created to bring its revolutionary technologies to the market of personalized molecular diagnostics. The company has representation in both U.S. and European markets. The collaborators of MultiplexDX are from the world’s most prestigious scientific organizations including the National Cancer Institute (MD, USA), Rockefeller University (NY, USA), Memorial Sloan Kettering Cancer Center (NY, USA), Queens University (Kingston, Ontario, Canada), University of Warsaw (Poland), and Technical University of Dresden (Germany).
MultiplexDX’s innovative platform merges histopathology, multiplexed spatial analysis of biomarkers, and laser capture microdissection RNA sequencing into one diagnostic test. This multimodal, cross-validated approach mitigates diagnostic errors, unveils tumor heterogeneity, and provides precise and accurate cancer profiling for each patient, which allows clinicians to suggest a specific, personalized cancer treatment.
Find out more about MultiplexDX on Corporate website, Facebook, LinkedIn, Twitter.
MultiplexDX’s innovative platform merges histopathology, multiplexed spatial analysis of biomarkers, and laser capture microdissection RNA sequencing into one diagnostic test. This multimodal, cross-validated approach mitigates diagnostic errors, unveils tumor heterogeneity, and provides precise and accurate cancer profiling for each patient, which allows clinicians to suggest a specific, personalized cancer treatment.
Find out more about MultiplexDX on Corporate website, Facebook, LinkedIn, Twitter.
Contact
ID: 4804858
Dátum zverejnenia: 10.4.2024
2024-04-10
lokalita: Bratislava Pozícia: Research Worker, Scientific Worker Spoločnosť: MultiplexDX, s.r.o.
Základná zložka mzdy (brutto): 2 500 EUR/month